Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGBL2ATP/GTP binding protein like 2. (852 aa)    
Predicted Functional Partners:
TTLL4
Tubulin tyrosine ligase like 4.
    
 
 0.690
RAPSN
Receptor associated protein of the synapse.
      
 0.675
PTPMT1
Protein tyrosine phosphatase mitochondrial 1.
      
 0.672
CADM2
Cell adhesion molecule 2.
      
 0.640
MTCH2
Mitochondrial carrier 2.
      
 0.636
TMEM192
Transmembrane protein 192.
    
 
 0.631
GLYATL2
glycine-N-acyltransferase like 2.
      
 0.608
ENSVPAP00000008792
annotation not available
      
 0.603
ENSVPAP00000004148
annotation not available
   
 
 0.538
PSD3
Pleckstrin and Sec7 domain containing 3.
      
 0.531
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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