Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FNBP4Formin binding protein 4. (986 aa)    
Predicted Functional Partners:
DDX17
DEAD-box helicase 17.
   
  0.916
ENSVPAP00000002882
annotation not available
      
 0.822
PNISR
PNN interacting serine and arginine rich protein.
   
    0.802
SRSF11
Serine and arginine rich splicing factor 11.
   
    0.788
PPFIA2
PTPRF interacting protein alpha 2.
    
 
 0.758
PPME1
Protein phosphatase methylesterase 1.
    
 0.728
DDX5
DEAD-box helicase 5.
   
 0.721
TCERG1
Transcription elongation regulator 1.
   
  
 0.718
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
   
 0.718
PPP2R5E
Protein phosphatase 2 regulatory subunit B'epsilon.
   
 0.718
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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