Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XDHXanthine dehydrogenase. (1305 aa)    
Predicted Functional Partners:
PGD
Phosphogluconate dehydrogenase.
    
 
 0.897
GDA
Guanine deaminase.
 
 
 0.855
PNP
Purine nucleoside phosphorylase.
   
 
 0.838
ENSVPAP00000011281
annotation not available
     
 0.805
ADAT2
Adenosine deaminase tRNA specific 2.
    
 0.797
MIPEP
Mitochondrial intermediate peptidase.
   
   0.792
AMDHD1
Amidohydrolase domain containing 1.
  
 
 0.786
RIMS2
Regulating synaptic membrane exocytosis 2.
    
   0.775
NIPBL
NIPBL cohesin loading factor.
    
   0.771
MOCOS
Molybdenum cofactor sulfurase.
   
 
 0.726
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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