Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA5ASemaphorin 5A. (1073 aa)    
Predicted Functional Partners:
PLXNC1
Plexin C1.
    
 0.869
NRP1
Neuropilin 1.
    
 0.762
ENSVPAP00000007223
annotation not available
    
 0.733
ENSVPAP00000011737
annotation not available
    
 0.733
ASNS
Asparagine synthetase (glutamine-hydrolyzing).
      
 0.681
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.675
CYFIP2
Cytoplasmic FMR1 interacting protein 2.
   
 
 0.660
ENSVPAP00000004444
annotation not available
      
 0.615
CCNI
Cyclin I.
      
 0.615
ENSVPAP00000008312
annotation not available
      
 0.610
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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