Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004925annotation not available (450 aa)    
Predicted Functional Partners:
ULK4
Unc-51 like kinase 4.
      
 0.923
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
     
  0.883
TECTB
Tectorin beta.
      
 0.845
ENSVPAP00000003922
annotation not available
   
  0.774
GJB2
Gap junction protein beta 2.
      
 0.734
CLRN2
Clarin 2.
      
 0.734
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.723
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
 0.717
MYO6
Myosin VI.
      
 0.688
PPP1R17
Protein phosphatase 1 regulatory subunit 17.
      
 0.685
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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