Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FGF14Fibroblast growth factor 14. (252 aa)    
Predicted Functional Partners:
EGF
Epidermal growth factor.
    
 0.735
SCN8A
Sodium voltage-gated channel alpha subunit 8.
   
 
 0.718
FGFR2
Fibroblast growth factor receptor 2.
    
 0.699
WNT8B
Wnt family member 8B.
   
 
 0.684
HGF
Hepatocyte growth factor.
      
 0.674
TGFB2
Transforming growth factor beta 2.
      
 0.663
PDGFRA
Platelet derived growth factor receptor alpha.
   
 0.650
LMBR1
Limb development membrane protein 1.
      
 0.649
ENSVPAP00000005562
annotation not available
      
 0.636
IGF1
Insulin like growth factor 1.
      
 0.632
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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