Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PFN1Profilin 1. (90 aa)    
Predicted Functional Partners:
ACTB
Actin beta.
   
 0.970
ENSVPAP00000001718
annotation not available
    
 0.952
DIAPH2
Diaphanous related formin 2.
    
 0.952
ENSVPAP00000006540
annotation not available
   
 0.949
PFN4
Profilin family member 4.
     
 0.905
ENSVPAP00000004192
annotation not available
   
 0.860
ENSVPAP00000003103
annotation not available
   
 0.811
CFL2
Cofilin 2.
   
 0.786
WASF1
WASP family member 1.
    
 
 0.761
DAAM1
Dishevelled associated activator of morphogenesis 1.
    
 0.760
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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