STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004946annotation not available (1033 aa)    
Predicted Functional Partners:
ENSVPAP00000006318
annotation not available
   
 0.977
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
  
 0.976
XPA
XPA, DNA damage recognition and repair factor.
    
 0.964
WRN
WRN RecQ like helicase.
  
 0.957
GTF2H1
General transcription factor IIH subunit 1.
    
 0.933
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.929
ENSVPAP00000000896
annotation not available
    
 0.917
CCNH
Cyclin H.
    
 0.911
FANCM
FA complementation group M.
   
 0.902
CDK7
Cyclin dependent kinase 7.
    
 0.888
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.