Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004947annotation not available (262 aa)    
Predicted Functional Partners:
MED25
Mediator complex subunit 25.
      
 0.731
INO80C
INO80 complex subunit C.
      
 0.629
C16orf72
Chromosome 16 open reading frame 72.
      
 0.585
VCP
Valosin containing protein.
   
 0.572
SPATA5L1
Spermatogenesis associated 5 like 1.
   
  0.560
SPATA5
Spermatogenesis associated 5.
   
  0.560
LSMEM1
Leucine rich single-pass membrane protein 1.
   
  
 0.515
KATNAL2
Katanin catalytic subunit A1 like 2.
    
 0.455
ENSVPAP00000005366
annotation not available
      
 0.449
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
    
  0.440
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.