Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000004987annotation not available (405 aa)    
Predicted Functional Partners:
EIF5B
Eukaryotic translation initiation factor 5B.
    
 
 0.955
STK4
Serine/threonine kinase 4.
    
 0.895
STK3
Serine/threonine kinase 3.
    
 0.895
ENSVPAP00000001357
annotation not available
   
    0.829
SAV1
Salvador family WW domain containing protein 1.
    
 
 0.670
LRRC59
Leucine rich repeat containing 59.
      
 0.629
TRMT1L
tRNA methyltransferase 1 like.
      
 0.611
EMB
Embigin.
    
   0.592
PCSK1
Proprotein convertase subtilisin/kexin type 1.
      
 0.523
ENSVPAP00000009007
annotation not available
      
 0.506
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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