Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BPIFCBPI fold containing family C. (465 aa)    
Predicted Functional Partners:
CD14
CD14 molecule.
   
 0.800
DEFB128
Defensin beta 128.
      
 0.611
DEFB115
Defensin beta 115.
      
 0.586
ENSVPAP00000010025
annotation not available
      
 0.586
TLR4
Toll like receptor 4.
   
 
 0.573
ENSVPAP00000010436
annotation not available
     
 0.549
ENSVPAP00000004114
annotation not available
   
  
 0.530
PLEKHA4
Pleckstrin homology domain containing A4.
      
 0.453
PADI3
Peptidyl arginine deiminase 3.
   
  
 0.451
DHRS9
Dehydrogenase/reductase 9.
      
 0.439
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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