Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOLR1Folate receptor alpha. (250 aa)    
Predicted Functional Partners:
ENSVPAP00000009621
annotation not available
    
 
 0.932
CEACAM16
CEA cell adhesion molecule 16, tectorial membrane component.
    
 0.712
COL3A1
Collagen type III alpha 1 chain.
     
 0.698
INO80D
INO80 complex subunit D.
      
 0.679
SLC30A5
Solute carrier family 30 member 5.
      
 0.679
TTR
Transthyretin.
      
 0.678
PI15
Peptidase inhibitor 15.
      
 0.649
TMEM216
Transmembrane protein 216.
      
 0.615
ENSVPAP00000004554
annotation not available
    
 0.611
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
      
 0.609
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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