Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLD1Phospholipase D1. (1073 aa)    
Predicted Functional Partners:
RHOA
Ras homolog family member A.
   
 0.760
ENSVPAP00000010613
annotation not available
   
 0.758
CDS1
CDP-diacylglycerol synthase 1.
    
 0.757
ARF6
ADP ribosylation factor 6.
   
 0.753
RAB8A
RAB8A, member RAS oncogene family.
     
 0.748
RHOB
Ras homolog family member B.
   
 0.732
PSPH
Phosphoserine phosphatase.
    
 0.731
ENSVPAP00000000672
annotation not available
    
 
 0.723
HYAL1
Hyaluronidase 1.
   
 0.719
RALB
RAS like proto-oncogene B.
   
 0.700
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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