Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOLPH3LGolgi phosphoprotein 3 like. (307 aa)    
Predicted Functional Partners:
GOLPH3
Golgi phosphoprotein 3.
   
   0.986
NUP210L
Nucleoporin 210 like.
      
 0.923
THOC5
THO complex 5.
   
  
 0.918
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 
 0.869
ABCC2
ATP binding cassette subfamily C member 2.
    
 
 0.865
RAB11A
RAB11A, member RAS oncogene family.
   
 
 0.849
ARCN1
Archain 1.
   
 
 0.849
COPA
Coatomer protein complex subunit alpha.
    
 
 0.848
EXTL3
Exostosin like glycosyltransferase 3.
    
   0.777
POMT2
Protein O-mannosyltransferase 2.
    
 
 0.771
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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