Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SETDB1SET domain bifurcated histone lysine methyltransferase 1. (1224 aa)    
Predicted Functional Partners:
ATF7IP
Activating transcription factor 7 interacting protein.
   
 0.999
TRIM33
Tripartite motif containing 33.
    
 0.979
ATF7IP2
Activating transcription factor 7 interacting protein 2.
   
 0.970
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
   0.963
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.957
TRIM24
Tripartite motif containing 24.
    
 0.926
ENSVPAP00000000588
annotation not available
    
 
 0.920
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.911
TASOR
Transcription activation suppressor.
   
 0.906
ENSVPAP00000004471
annotation not available
    
 0.897
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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