Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MEOX2Mesenchyme homeobox 2. (304 aa)    
Predicted Functional Partners:
MKX
Mohawk homeobox.
   
 0.759
DHH
Desert hedgehog signaling molecule.
    
 
 0.702
PBX1
PBX homeobox 1.
    
 0.655
PBX3
PBX homeobox 3.
    
 0.655
ENSVPAP00000006638
annotation not available
      
 0.646
FUCA2
alpha-L-fucosidase 2.
    
   0.626
ENSVPAP00000008291
annotation not available
    
 
 0.617
BABAM2
BRISC and BRCA1 A complex member 2.
    
 
 0.614
TBX22
T-box transcription factor 22.
    
 
 0.609
AGMO
Alkylglycerol monooxygenase.
 
    
 0.603
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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