Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLYBLCitrate lyase beta like. (319 aa)    
Predicted Functional Partners:
RNF8
Ring finger protein 8.
   
   0.894
ENSVPAP00000003396
annotation not available
  
 
 0.808
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
  
 0.782
HSPA9
Heat shock protein family A (Hsp70) member 9.
  
 0.776
GLRX3
Glutaredoxin 3.
    
 
 0.688
ENSVPAP00000002388
annotation not available
  
 0.687
HSPA5
Heat shock protein family A (Hsp70) member 5.
  
 0.687
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
  
 0.683
HSPA4
Heat shock protein family A (Hsp70) member 4.
  
 0.683
HSPH1
Heat shock protein family H (Hsp110) member 1.
  
 0.683
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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