Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALG2ALG2 alpha-1,3/1,6-mannosyltransferase. (415 aa)    
Predicted Functional Partners:
ALG11
ALG11 alpha-1,2-mannosyltransferase.
   
0.983
ENSVPAP00000002805
annotation not available
   
 0.968
ENSVPAP00000006922
annotation not available
    
 
 0.965
TSG101
Tumor susceptibility 101.
    
 
 0.912
FANCM
FA complementation group M.
   
 0.911
ENSVPAP00000010198
annotation not available
   
 0.893
BLM
BLM RecQ like helicase.
    
 
 0.892
GBE1
1,4-alpha-glucan branching enzyme 1.
  
 0.859
PLK2
Polo like kinase 2.
    
 
 0.854
ALG13
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
    
 0.845
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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