Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRRDSRR1 domain containing. (311 aa)    
Predicted Functional Partners:
HDGFL3
HDGF like 3.
      
 0.699
DUS4L
Dihydrouridine synthase 4 like.
   
  
 0.619
WDR26
WD repeat domain 26.
    
   0.611
RRP8
Ribosomal RNA processing 8.
      
 0.610
ENSVPAP00000003841
annotation not available
      
 0.597
ENSVPAP00000006166
annotation not available
      
 0.597
RMND5A
Required for meiotic nuclear division 5 homolog A.
    
   0.591
HMCN1
Hemicentin 1.
      
 0.586
ANTXR2
ANTXR cell adhesion molecule 2.
      
 0.582
ANKRD10
Ankyrin repeat domain 10.
      
 0.535
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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