Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFX3Regulatory factor X3. (747 aa)    
Predicted Functional Partners:
ATR
ATR serine/threonine kinase.
    
 
 0.904
FOXJ3
Forkhead box J3.
    
 
 0.894
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
    
   0.887
MYB
MYB proto-oncogene, transcription factor.
    
 
 0.852
CDC16
Cell division cycle 16.
    
 
 0.840
RORA
RAR related orphan receptor A.
      
 0.830
DMTF1
Cyclin D binding myb like transcription factor 1.
    
   0.830
FBXL3
F-box and leucine rich repeat protein 3.
    
   0.825
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 
 0.822
NF1
Neurofibromin 1.
      
 0.798
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.