Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000005097annotation not available (78 aa)    
Predicted Functional Partners:
ENSVPAP00000006889
annotation not available
   
   0.840
DYNC1LI2
Dynein cytoplasmic 1 light intermediate chain 2.
    
 0.822
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.822
CHM
CHM Rab escort protein.
    
 0.747
RAB14
RAB14, member RAS oncogene family.
   
 0.744
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 0.740
ENSVPAP00000009858
annotation not available
    
 0.703
ENSVPAP00000005781
annotation not available
    
 0.702
RILPL1
Rab interacting lysosomal protein like 1.
    
 0.692
ENSVPAP00000001586
annotation not available
    
 
 0.689
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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