Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC8Tetratricopeptide repeat domain 8. (505 aa)    
Predicted Functional Partners:
BBS2
Bardet-Biedl syndrome 2.
  
 
 0.999
ENSVPAP00000006670
annotation not available
  
 
 0.999
BBS9
Bardet-Biedl syndrome 9.
    
 0.999
BBS7
Bardet-Biedl syndrome 7.
  
 0.999
ENSVPAP00000011707
annotation not available
   
 0.999
BBS4
Bardet-Biedl syndrome 4.
  
 
 0.998
LZTFL1
Leucine zipper transcription factor like 1.
   
 0.995
ENSVPAP00000001628
annotation not available
    
 0.991
KLHL41
Kelch like family member 41.
    
 0.986
NME2
NME/NM23 nucleoside diphosphate kinase 2.
   
 0.916
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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