Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GFRA1GDNF family receptor alpha 1. (351 aa)    
Predicted Functional Partners:
GDNF
Glial cell derived neurotrophic factor.
    
 0.976
ENSVPAP00000006765
annotation not available
    
 0.916
KIT
KIT proto-oncogene, receptor tyrosine kinase.
    
 0.844
STIL
STIL centriolar assembly protein.
    
 0.811
FGFR2
Fibroblast growth factor receptor 2.
    
 0.811
ENSVPAP00000000437
annotation not available
      
 0.746
NCAM2
Neural cell adhesion molecule 2.
    
 0.740
ENSVPAP00000001337
annotation not available
   
  
 0.697
ENSVPAP00000003294
annotation not available
      
 0.689
SYCP3
Synaptonemal complex protein 3.
      
 0.687
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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