STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBXN2AUBX domain protein 2A. (260 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.983
UBXN7
UBX domain protein 7.
   
 
 0.971
VCPIP1
Valosin containing protein interacting protein 1.
    
 
 0.965
NSFL1C
NSFL1 cofactor.
    
   0.965
UBXN2B
UBX domain protein 2B.
    
   0.848
PLAA
Phospholipase A2 activating protein.
    
 
 0.835
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.822
SPATA5
Spermatogenesis associated 5.
   
 0.822
UBXN8
UBX domain protein 8.
    
 
 0.821
ENSVPAP00000009826
annotation not available
   
 
 0.820
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.