STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRTM4Leucine rich repeat transmembrane neuronal 4. (319 aa)    
Predicted Functional Partners:
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 
 0.916
ADGRL3
Adhesion G protein-coupled receptor L3.
    
 
 0.909
NRXN3
Neurexin 3.
   
 0.843
NRXN1
Neurexin 1.
   
 0.843
ENSVPAP00000003790
annotation not available
    
 
 0.839
CPQ
Carboxypeptidase Q.
     
 0.824
ARFGEF3
ARFGEF family member 3.
      
 0.824
NLGN2
Neuroligin 2.
   
  
 0.784
NTNG1
Netrin G1.
    
 0.782
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.708
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.