STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERECatsper channel auxiliary subunit epsilon. (950 aa)    
Predicted Functional Partners:
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
  
 
 0.828
CATSPER4
Cation channel sperm associated 4.
  
 
 0.825
CATSPER2
Cation channel sperm associated 2.
    
 0.797
ENSVPAP00000005837
annotation not available
    
 0.797
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.783
ENSVPAP00000001474
annotation not available
    
 0.754
SLCO4C1
Solute carrier organic anion transporter family member 4C1.
    
   0.733
SLCO6A1
Solute carrier organic anion transporter family member 6A1.
    
   0.733
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.711
IFT57
Intraflagellar transport 57.
    
 0.699
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.