STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALCGalactosylceramidase. (619 aa)    
Predicted Functional Partners:
ASAH1
N-acylsphingosine amidohydrolase 1.
     
 0.949
SMPD1
Sphingomyelin phosphodiesterase 1.
     
 0.947
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.936
ENSVPAP00000005594
annotation not available
     
 0.935
CERS3
Ceramide synthase 3.
     
 0.932
CERS6
Ceramide synthase 6.
     
 0.932
SGMS2
Sphingomyelin synthase 2.
     
 0.923
GLA
Galactosidase alpha.
     
 0.923
ENSVPAP00000003925
annotation not available
     
 0.918
ENSVPAP00000000986
annotation not available
     
 0.913
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.