STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGFRNProstaglandin F2 receptor inhibitor. (861 aa)    
Predicted Functional Partners:
CD9
CD9 molecule.
    
 
 0.903
ENSVPAP00000008575
annotation not available
      
 0.824
ENSVPAP00000000067
annotation not available
      
 0.822
FILIP1L
Filamin A interacting protein 1 like.
      
 0.799
ENSVPAP00000000696
annotation not available
    
 
 0.753
ENSVPAP00000007997
annotation not available
    
 
 0.745
CD63
CD63 molecule.
    
 
 0.702
SHCBP1L
SHC binding and spindle associated 1 like.
      
 0.598
EDRF1
Erythroid differentiation regulatory factor 1.
      
 0.585
TSPAN3
Tetraspanin 3.
    
 
 0.583
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.