STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000007938annotation not available (323 aa)    
Predicted Functional Partners:
ENSVPAP00000006199
annotation not available
   
 0.923
POP5
POP5 homolog, ribonuclease P/MRP subunit.
    
 0.879
LPXN
Leupaxin.
   
 0.870
RPP30
Ribonuclease P/MRP subunit p30.
    
 0.867
ENSVPAP00000002893
annotation not available
    
 0.862
RPP21
Ribonuclease P/MRP subunit p21.
    
  0.851
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.846
RPP14
Ribonuclease P/MRP subunit p14.
    
  0.834
ACTB
Actin beta.
    
 0.818
ENSVPAP00000009977
annotation not available
  
  
 
0.804
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.