STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000009322annotation not available (104 aa)    
Predicted Functional Partners:
DYNC2LI1
Dynein cytoplasmic 2 light intermediate chain 1.
   
 0.950
WDR60
WD repeat domain 60.
    
 0.936
DYNLRB2
Dynein light chain roadblock-type 2.
  
 0.931
DYNLL2
Dynein light chain LC8-type 2.
    
 0.928
ENSVPAP00000010572
annotation not available
    
 0.891
FAM227A
Family with sequence similarity 227 member A.
   
    0.843
CCDC175
Coiled-coil domain containing 175.
   
    0.843
CCNO
Cyclin O.
   
    0.843
DYNLL1
Dynein light chain LC8-type 1.
    
 0.803
DYNLT1
Dynein light chain Tctex-type 1.
    
 
 0.746
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.