STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM2D3TM2 domain containing 3. (247 aa)    
Predicted Functional Partners:
NHLRC2
NHL repeat containing 2.
      
 0.840
ENSVPAP00000001269
annotation not available
      
 0.833
LAMTOR3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
      
 0.796
MCEE
methylmalonyl-CoA epimerase.
      
 0.789
NCKAP1L
NCK associated protein 1 like.
      
 0.774
ENSVPAP00000002635
annotation not available
      
 0.742
ENSVPAP00000000325
annotation not available
      
 0.736
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
      
 0.718
PIGA
Phosphatidylinositol glycan anchor biosynthesis class A.
     
 0.656
PIGH
Phosphatidylinositol glycan anchor biosynthesis class H.
   
 
 0.643
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.