STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000009865annotation not available (365 aa)    
Predicted Functional Partners:
SNX4
Sorting nexin 4.
    
0.955
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
 0.874
FKBP15
FKBP prolyl isomerase 15.
      
 0.824
SNX6
Sorting nexin 6.
   
 0.823
SNX32
Sorting nexin 32.
   
 0.823
VPS35
VPS35 retromer complex component.
   
 
 0.805
VPS26A
VPS26, retromer complex component A.
    
 
 0.799
ZFP37
ZFP37 zinc finger protein.
      
 0.786
VPS29
VPS29 retromer complex component.
    
 
 0.784
SNX5
Sorting nexin 5.
   
0.739
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.