STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSLCSL protein. (442 aa)    
Predicted Functional Partners:
ROC15
RHYTHM OF CHLOROPLAST 15.
      
 0.833
CPL2
GATA-type domain-containing protein.
      
 0.747
ROC114
RHYTHM OF CHLOROPLAST 114.
      
 0.648
ROC40
RHYTHM OF CHLOROPLAST 40.
     
 0.626
CPH1
Cryptochrome photoreceptor.
      
 0.483
A0A2K3CZB9
Uncharacterized protein.
    
 0.479
A8JDZ8_CHLRE
Predicted protein.
    
  0.420
A0A2K3CUU7
Uncharacterized protein.
    
  0.407
A0A2K3DGN3
SAP domain-containing protein.
    
  0.407
A0A2K3DNB4
Uncharacterized protein.
    
  0.407
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.