STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3CS28N-acetyltransferase domain-containing protein. (3176 aa)    
Predicted Functional Partners:
SEC13
COP-II coat subunit; Belongs to the WD repeat SEC13 family.
   
 0.911
SEC23B
Uncharacterized protein.
   
 0.879
SEC23A
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.879
SEC31
COP-II coat subunit.
   
 0.855
A0A2K3CRQ7
Uncharacterized protein.
   
 0.823
A0A2K3CRQ9
Uncharacterized protein.
   
 0.823
SEC24C
Uncharacterized protein.
   
 0.753
A0A2K3DDF0
Uncharacterized protein.
   
 0.753
SEC24A
Uncharacterized protein.
   
 0.753
SAR1
Sar-type small GTPase; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.753
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.