STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3CVM5Uncharacterized protein. (1543 aa)    
Predicted Functional Partners:
A0A2K3D1C9
Uncharacterized protein.
    
 0.828
A0A2K3CZF6
Uncharacterized protein.
   
 0.821
A0A2K3DSJ8
3'-5' exonuclease domain-containing protein.
   
 0.820
A0A2K3DYB5
FHA domain-containing protein.
    
 0.790
A0A2K3D5Q6
Mre11_DNA_bind domain-containing protein.
   
 0.787
A0A2K3D8A8
MPN domain-containing protein.
    
 0.728
A0A2K3DYE8
AAA_23 domain-containing protein.
    
 0.709
A0A2K3DLI8
Uncharacterized protein.
   
 0.698
UBCH1p
Ubiquitin carboxyl-terminal hydrolase.
    
 0.693
RAD51
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination; Belongs to the RecA family. RAD51 subfamily.
   
 0.690
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.