STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLR4Uncharacterized protein. (832 aa)    
Predicted Functional Partners:
UPF2
Uncharacterized protein.
     
 0.636
RPL4
Ribosomal protein L4.
    
 0.560
ARP2
Actin-related protein; Belongs to the actin family.
    
 
 0.539
ORC4
Origin recognition complex subunit 4.
      
 0.519
IPB1
Importin N-terminal domain-containing protein.
      
 0.518
ESP1
Peptidase C50 domain-containing protein.
     
 0.506
CDC6
Pre-initiation complex, subunit CDC6.
      
 0.479
A0A2K3DLR9
Uncharacterized protein.
      
 0.476
IPA1
Importin subunit alpha; Belongs to the importin alpha family.
      
 0.446
SEC13
COP-II coat subunit; Belongs to the WD repeat SEC13 family.
     
 0.435
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.