STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG7Tr-type G domain-containing protein. (726 aa)    
Predicted Functional Partners:
MRPS6
Mitochondrial ribosomal protein S6.
   
 
 0.698
RPL5
Ribosomal protein L5.
   
 
 0.697
RPS3
Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.670
RPL7
Uncharacterized protein.
    
 
 0.619
RIR1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.613
A0A2K3D693
Uncharacterized protein.
  
 
 0.602
A0A2K3DF88
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.602
RPL23a
Ribosomal protein L23a.
   
 
 0.585
MRPL33
Mitochondrial ribosomal protein L33.
   
   0.578
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.570
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.