STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3D742Uncharacterized protein. (958 aa)    
Predicted Functional Partners:
A0A2K3DZT7
Uncharacterized protein.
    
 0.599
A0A2K3DHL5
Uncharacterized protein.
    
 0.551
A0A2K3D5X4
ERCC4 domain-containing protein.
    
 0.524
SMP3
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.494
SMPF
Small nuclear riboprotein F.
    
  0.474
A0A2K3E175
Uncharacterized protein.
   
 0.464
A0A2K3DZJ0
DNA_pol_B domain-containing protein.
   
 0.456
POLD1
DNA polymerase.
   
 0.456
SMP2
Small nuclear ribonucleoprotein G.
    
  0.442
A0A2K3DIH9
Uncharacterized protein.
    
 0.426
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.