STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP1B1B2-adapt-app_C domain-containing protein. (859 aa)    
Predicted Functional Partners:
A0A2K3D282
Alpha_adaptinC2 domain-containing protein.
   
 0.945
CHC1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.945
AP2S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.944
A0A2K3DRS2
Adaptin_N domain-containing protein.
   
0.921
A0A2K3CVC5
AP-1 complex subunit gamma.
   
0.908
AP2M2
Mu2-Adaptin; Belongs to the adaptor complexes medium subunit family.
   
 0.905
AP4S4
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.886
AP1S1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.886
CLC1
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.886
TEF2
Rhodanese-like Ca-sensing receptor.
   
 0.858
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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