STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3D9Q5UBIQUITIN_CONJUGAT_2 domain-containing protein. (1091 aa)    
Predicted Functional Partners:
UBA1
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.905
UBCX
Ubiquitin-conjugating enzyme E2 isoform.
   
 0.831
PCN1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.800
A0A2K3CT82
Uncharacterized protein.
    
 0.792
A0A2K3CYB9
E3 ubiquitin protein ligase.
    
 0.792
RPL40
Ribosomal protein L40.
   
 0.763
A0A2K3DI63
Ubiquitin-like domain-containing protein.
    
 0.750
RPS27a
Ribosomal protein S27a.
    
 0.750
RBX1
Ring-box protein.
    
 0.707
A0A2K3E253
Uncharacterized protein.
    
 0.689
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.