STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3DAT4Reverse transcriptase domain-containing protein. (277 aa)    
Predicted Functional Partners:
A0A2K3D751
Reverse transcriptase domain-containing protein.
  
     0.526
RPL21
Uncharacterized protein.
   
   0.516
A0A2K3D1C9
Uncharacterized protein.
    
 0.482
RPL13a
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.482
A0A2K3D7V6
Reverse transcriptase domain-containing protein.
  
     0.461
A0A2K3D9B7
Uncharacterized protein.
  
     0.456
RPL8
Ribosomal_L2_C domain-containing protein.
   
 
 0.452
MRPL2
Ribosomal_L2_C domain-containing protein.
   
 
 0.419
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
   
 
 0.419
PRPL13
Plastid ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.416
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.