STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3DPP9DRBM domain-containing protein. (2037 aa)    
Predicted Functional Partners:
A0A2K3DQ55
Uncharacterized protein.
   
 0.918
RPB3
RPOLD domain-containing protein.
    
 0.890
A0A2K3DZR4
TFIIF_beta_N domain-containing protein.
    
 0.848
A0A2K3DII3
RPOL4c domain-containing protein.
    
 0.837
RPB11
DNA-directed RNA polymerase II, 13.6 kDa polypeptide.
    
 0.789
A8IRG8_CHLRE
Predicted protein.
    
 0.774
RPB7A
DNA-directed RNA polymerase II, 19 kDa polypeptide.
    
 0.774
CDKC1
Protein kinase domain-containing protein.
   
 0.764
A8I2N9_CHLRE
Transcription initiation factor.
    
 0.761
RPB6
Uncharacterized protein.
   
 0.752
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.