STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3DQ55Uncharacterized protein. (640 aa)    
Predicted Functional Partners:
A0A2K3DIN8
Uncharacterized protein.
    
  0.999
A0A2K3DZR4
TFIIF_beta_N domain-containing protein.
   
 0.999
A0A2K3D2G5
TFIIE beta domain-containing protein.
   
 0.998
A0A2K3D8S0
TFIIE domain-containing protein.
    
 0.998
A0A2K3DRL9
TFIIB-type domain-containing protein.
    
 0.998
RPB9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.998
RPB3
RPOLD domain-containing protein.
    
 0.997
RPB5
Uncharacterized protein.
   
 0.997
TFB4
Uncharacterized protein.
    
 0.995
RPB11
DNA-directed RNA polymerase II, 13.6 kDa polypeptide.
    
 0.995
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.