STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3DQX7Uncharacterized protein. (601 aa)    
Predicted Functional Partners:
A0A2K3DIH9
Uncharacterized protein.
    
 0.999
A0A2K3DMV5
Uncharacterized protein.
    
 0.999
A0A2K3DRJ8
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.964
RAE1
mRNA export protein.
   
 0.962
A0A2K3DDA3
Nucleoporin_N domain-containing protein.
   
 0.957
A0A2K3DI91
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.918
A0A2K3CT54
Uncharacterized protein.
    
 0.914
A0A2K3D060
Uncharacterized protein.
    
 0.914
A0A2K3DM87
Uncharacterized protein.
    
 0.914
SEC13L
COP-II coat subunit, nucleoporin; Belongs to the WD repeat SEC13 family.
    
 0.914
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.