STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3DSD8Uncharacterized protein. (1301 aa)    
Predicted Functional Partners:
A0A2K3CYN9
Autophagy protein 5; Required for autophagy.
   
 0.907
APG12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
    
 0.899
A8I0Q7_CHLRE
Predicted protein.
   
 0.890
APG3
Autophagy-related protein 3.
   
 0.858
A0A2K3DE59
Protein kinase domain-containing protein.
    
 
 0.764
A0A2K3E601
Uncharacterized protein.
    
 0.757
APG8
Autophagy-related protein.
    
 0.744
A0A2K3E706
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.724
A0A2K3DQD5
Uncharacterized protein.
     
 0.716
A0A2K3DWN6
Uncharacterized protein.
     
 0.716
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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