STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3DVV0PseudoU_synth_1 domain-containing protein. (719 aa)    
Predicted Functional Partners:
IGS1
IGPS domain-containing protein.
     
 0.755
A0A2K3DHL4
Uncharacterized protein.
   
 
 0.712
A0A2K3CPH6
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
   0.573
RPB3
RPOLD domain-containing protein.
  
  
 0.569
A0A2K3DII1
RPOLD domain-containing protein.
  
  
 0.569
RAA2
TruB_N domain-containing protein.
   
 0.561
A0A2K3CU80
Uncharacterized protein.
   
 0.561
CBF5
PUA domain-containing protein.
   
 0.561
A0A2K3E560
TRUD domain-containing protein.
   
 
 0.511
MRPL17
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.498
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.