STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPS14-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (349 aa)    
Predicted Functional Partners:
DPR1
Dihydrodipicolinate reductase.
     
 0.978
HSD1
Homoserine dehydrogenase.
   
 
 0.974
ASSD1
Aspartate semialdehyde dehydrogenase.
     
 0.940
AHD1
Uncharacterized protein.
   
 
 0.938
DPD1
Diaminopimelate decarboxylase.
  
  
 0.780
HSK1
Homoserine kinase.
      
 0.735
DAE1
Uncharacterized protein.
   
  
 0.685
CGS1
Cystathionine gamma-synthase.
      
 0.674
METC
Uncharacterized protein.
      
 0.601
A0A2K3CV96
PKS_ER domain-containing protein.
  
 
 0.470
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.