STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K3E5J6HELP domain-containing protein. (913 aa)    
Predicted Functional Partners:
A0A2K3DIN8
Uncharacterized protein.
   
 0.791
MAD2
HORMA domain-containing protein.
   
 0.742
IFT140
WD_REPEATS_REGION domain-containing protein.
    
 0.705
A0A2K3DLD4
BUB1 N-terminal domain-containing protein.
   
 0.703
A0A2K3CTW2
Uncharacterized protein.
    
 0.677
CYCB1
Cyclin N-terminal domain-containing protein.
   
 0.667
A0A2K3DTR4
WD_REPEATS_REGION domain-containing protein.
   
 0.667
A0A2K3DU98
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.667
A0A2K3CZU5
CPSF_A domain-containing protein.
   
 0.661
A8JFR8_CHLRE
Predicted protein.
    
 0.654
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.