STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYP71Qc-SNARE protein, SYP7-family. (269 aa)    
Predicted Functional Partners:
SYP8
Uncharacterized protein.
     
 0.925
SYP5
Qc-SNARE protein, Syn8/Syntaxin8-family; Belongs to the syntaxin family.
     
 0.923
SEC22
R-SNARE protein, Sec22-family; Belongs to the synaptobrevin family.
     
 0.906
SYP72
Qc-SNARE protein, SYP7-family.
  
  
0.902
SEC20
Uncharacterized protein.
     
 0.884
A0A2K3DJ20
Uncharacterized protein.
  
 
 0.763
RABC1
Small rab-related GTPase.
      
 0.763
RABD1
Small rab-related GTPase.
      
 0.763
SYP6
Qc-SNARE protein, Tlg1/Syntaxin 6-family; Belongs to the syntaxin family.
     
0.712
DAK1
Uncharacterized protein.
  
 0.649
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.