STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYP5Qc-SNARE protein, Syn8/Syntaxin8-family; Belongs to the syntaxin family. (243 aa)    
Predicted Functional Partners:
YKT6
R-SNARE protein, YKT6-family; Belongs to the synaptobrevin family.
    
 0.973
A0A2K3D037
t-SNARE coiled-coil homology domain-containing protein.
    
 0.960
SNAPA1
Alpha-SNAP.
    
 0.956
SYP8
Uncharacterized protein.
   
 0.954
SYP4
Qa-SNARE protein, Tlg2/Syntaxin16-family; Belongs to the syntaxin family.
    
 0.954
A0A2K3E5E3
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.939
SYP71
Qc-SNARE protein, SYP7-family.
     
 0.923
VMPL2
V-SNARE coiled-coil homology domain-containing protein.
    
 0.906
VMPL1
R-SNARE protein, VAMP-like family.
    
 0.906
SYP3
Qa-SNARE protein, Sed5/Syntaxin5-family; Belongs to the syntaxin family.
    
 0.893
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.